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Accession Number |
TCMCG057C08443 |
gbkey |
CDS |
Protein Id |
XP_018470064.1 |
Location |
complement(join(34463294..34463485,34463573..34463815,34463891..34464169,34464259..34464456,34464567..34464728,34464903..34465376,34465456..34465710,34465805..34465911,34465999..34466615,34466742..34466995,34467230..34467527,34467622..34467745,34467837..34468078,34468192..34468318,34468401..34468855,34468932..34469236,34469330..34469524,34478931..34479050,34479193..34479461,34479554..34480344,34480432..34480918,34481004..34481394,34481487..34481579,34481664..34481787,34481881..34482167)) |
Gene |
LOC108841801 |
GeneID |
108841801 |
Organism |
Raphanus sativus |
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Length |
2362aa |
Molecule type |
protein |
Topology |
linear |
Data_file_division |
PLN |
dblink |
BioProject:PRJNA344915 |
db_source |
XM_018614562.1
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Definition |
PREDICTED: pre-mRNA-processing-splicing factor 8A-like isoform X1 [Raphanus sativus] |
CDS: ATGTGGAACAGCAACGACGGCATGCCGTTAGCCCCTCCCGGCACCGGCGCCTCGATGATTCCGCCACCGCATCCTTCTTACACCGCGCTTCCGCCGCATCCTTCTAATCCAACTCCTCCTCCTCCTCCGGTCGAGCCTACTCCCGAAGAAGCTGAGGCGAAGCTCGAGGAGAAGGCGCGCAAATGGATGCAGCTGAACTCGAAGCGCTACGGCGACAAGAGGAAGTTCGGATTCGTGGAAACTCAGAAGGAGGACATGCCACCTGAGCACGTCAGGAAGATTATCAGGGATCATGGTGATATGTCATCGAAGAAGTTTAGTCACGATAAACGTGTGTACCTTGGAGCTCTTAAGTTCGTCCCTCACGCTGTCTTCAAGCTCCTTGAGAATATGCCTATGCCCTGGGAGCAGGTTCGAGATGTTAAGGTTCTGTACCACATCACCGGAGCTATTACATTCGTTAACGAGATTCCATGGGTTGTGGAACCTATTTACATGGCTCAGTGGGGTACTATGTGGATTATGATGCGAAGGGAGAAGAGGGATCGTCGTCATTTCAAGAGGATGCGGTTTCCACCGTTTGATGATGAGGAGCCTCCACTGGACTACGCAGACAACTTGTTGGACGTTGATCCTCTCGAGCCAATTCAGTTGGAGCTTGACGAGGAAGAAGATTCTGCTGTACACACGTGGTTTTATGACCACAAGCCTCTAGTAAAGACCAAGCTGATTAATGGTCCCAGTTACCGGAGGTGGAATCTCTCTCTTCCGATTATGGCTACCCTTCACAGGCTGGCAGGCCAGTTGTTGTCTGATTTGATCGATCGCAACTACTTCTACTTGTTTGACATGCCGTCTTTCTTCACCGCCAAGGCTCTTAACATGTGTATACCTGGTGGTCCTAAGTTTGAACCTTTGTACCGTGATATGGAGAAAGGGGATGAGGACTGGAATGAGTTCAACGACATCAACAAGCTTATCATTCGTTCCCCTCTTCGAACCGAGTACAGAATAGCTTTTCCTCACCTGTACAACAATCGTCCCAGGAAAGTCAAACTCTGTGTGTATCACAGTCCTATGGTGATGTATATAAAGACCGAGGATCCTGATCTTCCTGCCTTTTATTATGATCCGTTGCTTCACCCGATAAGCAACACCAATAAGGAGAGGCGTGAAAGGAACGTTTATGAAGATGATGGTGAGGATGACTTTACCTTACCAGAGGGAGTGGAACCTTTGCTAAAAGACACCCACCTCTACACTGACACTACAGCTGCTGGCATTTCATTGCTGTTTGCCCCACGACCTTTCAATATGAGGTCTGGGAAAACAAGGCGATCAGAAGATATTCCTTTGGTGTCAGAGTGGTTCAAGGAGCACTGTCCTCCAGCTTATCCGGTTAAAGTTCGAGTTAGTTACCAAAAGCTTTTGAAGTGCTATGTTCTGAATGAGTTGCACCATAGACCACCTAAAGCCCAGAAGAAGAAGCACTTATTCCGCTCTCTTGCAGCTACAAAGTTTTTCCAGAGTACTGAATTGGATTGGGTTGAAGTAGGCCTGCAAGTCTGCAGGCAGGGGTATAATATGCTGAACCTGCTGATCCACAGGAAGAGTTTGAACTACCTGCACCTTGACTACAACTTCAACCTGAAGCCTGTTAAAACATTGACCACCAAAGAGCGAAAGAAGTCACGTTTTGGGAACGCTTTCCATCTCTGCCGTGAGATCCTCCGGCTGACAAAGCTTGTCGTAGATGCAAATGTCCAGTTCAGACTTGGAAATGTTGATGCTTTCCAATTGGCTGACGGTCTGCAGTATATTTTCTCCCATGTTGGCCAGTTGACGGGTATGTATCGTTACAAATACAGACTGATGAGGCAGATTAGGATGTGCAAGGATTTGAAGCACTTGATATATTACCGTTTCAATACCGGTCCTGTGGGTAAGGGACCAGGGTGTGGATTTTGGGCCCCAATGTGGAGGGTATGGTTGTTTTTCCTTCGTGGAATAGTTCCTCTTCTTGAACGATGGCTAGGGAATCTTCTTGCTCGTCAGTTTGAGGGGCGTCATTCAAAAGGAGTTGCCAAAACTGTCACGAAACAGAGAGTTGAGAGTCACTTCGATTTGGAACTGCGAGCTGCTGTCATGCATGACGTTCTTGATGCCATGCCAGAGGGTATCAAGCAAAACAAAGCTCGAACAATATTACAGCACCTTAGCGAGGCCTGGCGATGTTGGAAAGCTAATATCCCTTGGAAGGTCCCTGGATTACCCGTGCCAATTGAGAATATGATCCTGCGTTATGTCAAATCTAAGGCTGATTGGTGGACAAATGTTGCTCACTACAATCGTGAGCGTATCAGAAGAGGGGCTACGGTTGATAAGACTGTTTGCAGAAAGAATCTTGGAAGGTTGACTCGTCTCTGGCTAAAGGCTGAACAGGAACGGCAGCACAATTACCTGAAAGATGGTCCATATGTCACTCCAGAGGAAGCACTAGCAATTTATACAACTACTGTTCACTGGCTGGAATCGAGGAAATTTTCTCCAATTCCGTTCCCGCCATTGTCTTACAAACATGACACAAAGTTGCTTATCCTGGCCCTTGAGAGACTGAAGGAATCATACAGTGTTGCTGTGAGGTTGAATCAGCAGCAGCGAGAGGAGCTTGGTCTGATTGAACAAGCGTATGACAATCCTCATGAAGCTCTGTCAAGAATTAAACGTCATCTTCTCACCCAGCGTGGCTTCAAAGAGGTTGGCATAGAGTTTATGGATCTATACAGCTACTTGATTCCAGTTTATGAAATAGAGCCTCTGGAGAAAATAACTGATGCCTACCTTGACCAATACTTGTGGTACGAGGGTGATAAGCGCCACTTGTTCCCAAACTGGATCAAGCCAGCAGACTCAGAGCCGCCACCACTTCTGGTTTACAAGTGGTGTCAAGGTATCAATAATTTACAAGGCATATGGGACACGGGGGATGGGCAATGTGTGGTGATGCTGCAGACTAAGTTTGAAAAGTTCTTTGAGAAGATCGATTTGACCATGTTGAACAGGCTGCTTCGTTTGGTTCTTGACCACAATATAGCGGATTATGTGTCTGCCAAGAATAACGTGGTTCTTTCTTACAAAGATATGAGTCATACTAACTCGTATGGTCTGATTAGGGGACTTCAGTTTGCATCTTTTGTTGTTCAGTTTTATGGACTATTGCTTGATCTTTTGCTTCTTGGTCTGACTCGGGCGAGTGAAATTGCTGGGCCACCACAGATGCCCAACGAGTTTATGACGTTTTGGGATACAAAAGTGGAGACACGGCATCCCATAAGACTGTATTCTCGGTATATAGACAAAGTTCATATAATGTTCAAATTTACCCATGAAGAGGCCAGGGATCTTATTCAGCGCTATCTTACTGAGCATCCTGATCCCAACAATGAAAACATGGTGGGATACAACAATAAGAAGTGCTGGCCAAGAGATGCAAGGATGAGGTTGATGAAACATGATGTCAATCTTGGTAGAAGTGTCTTCTGGGACATGAAGAATCGTCTTCCTCGGAGCATAACAACTTTGGAGTGGGAGAATGGCTTTGTCTCTGTCTACAGCAAGGATAATCCCAACCTGCTCTTCAGCATGTGTGGATTTGAAGTTCGCATACTTCCAAAAATCAGGATGACTCAGGAAGCTTTCAGCAACACAAGAGATGGTGTCTGGAATCTGCAAAATGAGCAGACCAAGGAGAGGACTGCCGTTGCTTTTCTGCGGGTTGATGATGAACACATGAAGGTGTTTGAGAATCGTGTCAGGCAGATCCTTATGTCTTCAGGATCAACCACCTTCACCAAAATTGTCAATAAATGGAATACAGCTCTAATTGGTCTCATGACCTACTTCCGTGAAGCCACTGTGCATACTCAAGAGCTCTTGGATCTACTCGTGAAGTGCGAAAACAAAATTCAAACAAGGATTAAGATAGGGCTGAACTCGAAGATGCCTAGTCGGTTTCCTCCCGTTATCTTCTACACTCCGAAAGAAATTGGTGGGCTGGGAATGTTGTCAATGGGTCATATTTTGATTCCACAAAGTGACCTTCGGTACAGCAAGCAGACAGATGTAGGGGTAACCCACTTTAGGAGTGGAATGAGCCATGAGGAAGATCAGCTTATACCAAATCTGTATCGTTACATACAGCCATGGGAAAGTGAGTTTATTGATTCACAGCGGGTGTGGGCAGAGTATGCTTTAAAGAGGCAGGAAGCACAGGCTCAAAATAGGCGTCTTACGTTGGAGGATTTGGAGGACTCTTGGGATAGGGGAATTCCTCGAATAAACACACTCTTTCAGAAGGATAGGCACACGTTAGCGTATGATAAAGGTTGGAGGGTTCGGACCGACTTTAAGCAGTACCAAGTCCTCAAACAAAATCCTTTCTGGTGGACGCACCAGAGGCATGATGGGAAGCTGTGGAATTTAAACAATTACCGAACTGATGTTATCCAAGCTCTTGGAGGTGTTGAGGGTATCCTTGAGCACACTTTATTCAAGGGGACATACTTCCCAACATGGGAGGGTCTTTTCTGGGAGAAGGCATCTGGGTTTGAGGAGTCGATGAAATATAAGAAGCTGACGAATGCACAGAGGTCTGGTCTGAACCAGATTCCAAACAGAAGATTCACGCTTTGGTGGTCGCCAACAATAAATCGAGCGAATGTTTATGTGGGTTTCCAAGTGCAGTTGGATCTGACAGGAATTTTTATGCATGGAAAGATTCCTACACTGAAGATATCTCTGATTCAGATTTTCCGTGCCCATTTGTGGCAAAAGATCCATGAGAGTGTTGTTATGGATCTTTGTCAAGTATTGGACCAAGAGTTGGATGCTTTGGAGATTGAAACTGTTCAGAAGGAGACAATTCATCCAAGGAAGAGTTATAAGATGAACAGCTCCTGCGCTGATGTTCTTCTGTTTGCTGCCCATAAATGGCCAATGTCAAAACCAAGCCTGGTTGCTGAGTCAAAGGATGTGTTCGACCAGAAAGCTAGCAACAAGTATTGGATAGATGTGCAACTTCGGTGGGGAGATTATGATTCCCATGATATTGAGCGTTATACTAGGGCCAAATTCATGGATTATACAACTGATAACATGTCAATCTATCCATCTCCAACAGGTGTAATGATTGGGCTTGATCTGGCATACAATTTGCATTCTGCATTTGGCAATTGGTTCCCAGGTTCTAAACCTCTTCTTGCTCAAGCAATGAACAAGATCATGAAGTCTAATCCAGCTCTGTACGTGTTGAGAGAGAGGATAAGGAAAGGTTTGCAGTTGTACTCATCTGAGCCTACAGAGCCTTATTTGTCATCGCAAAACTATGGTGAAATATTCAGCAATCAAATTATATGGTTTGTCGATGATACCAATGTCTATCGTGTTACAATTCACAAGACATTTGAAGGAAATTTAACAACAAAGCCTATCAATGGTGCGATCTTTATTTTTAATCCAAGAACTGGGCAGCTATTCCTGAAGGTTATCCATACAAGCGTTTGGGCTGGTCAGAAGCGTCTTGGTCAGCTAGCGAAATGGAAGACTGCTGAAGAGGTGGCTGCCCTTGTGCGGTCTCTCCCTGTTGAAGAACAGCCAAAACAAGTTATTGTTACTCGCAAAGGAATGCTCGATCCCCTTGAGGTCCACTTACTGGATTTCCCCAACATTGTTATCAAGGGAAGTGAACTGCAGCTTCCATTCCAGGCGTGCCTTAAGATAGAGAAATTTGGTGATCTGATTTTGAAGGCCACAGAACCACAGATGGTCCTATTCAATATCTATGATGATTGGTTGAAGAGTATCTCTTCGTATACTGCCTTTTCAAGACTCATTCTGATCCTTCGTGCGCTTCACGTGAATAATGAGAAGGCTAAGATGCTGCTGAAGCCCGACAAGTCTATTGTCACTGAGCCGCATCACATCTGGCCCTCTCTCACTGACGACCAGTGGATGAAGGTGGAGGTAGCTCTTAGGGATCTTATCCTATCTGACTATGCAAAGAAGAACAATGTGAATACCTCAGCTCTGACACAATCAGAGATCAGAGATATTATCCTTGGAGCTGAGATTACCCCACCCTCTCAACAGAGGCAACAGATAGCTGAGATCGAGAAACAGGCAAAAGAAGCCAGCCAGCTTACTGCAGTCACAACCAGAACGACAAATATTCATGGTGATGAGCTCATTAGCACTACCATTAGCCCCTACGAGCAAGCTGCATTCGGTTCCAAGACAGATTGGCGTGTGCGTGCAATATCATCTACGAACCTCTACCTCAGAGTCAATCATATCTACGTGAACTCTGATGACATAAAGGAGACCGGATACACATACATCATGCCAAAGAACATCCTGAAGAAGTTCATATGCGTAGCAGATCTTCGTAGTCAAATTGCTGGATATCTATATGGTATAAGCCCCCCTGATAATCCCCAGGTGAAGGAAATCCGTTGTGTTGTGATGGTGCCACAGCTGGGAAATCACCAGCAAGTTAACCTGCCGTTAGCTCTTCCTGAGCATGATTTCTTAAATAATCTCGAGCCATTGGGATGGCTGCACACACAGCCTAACGAGCTCCCTCAATTGTCACCACAGGATGTGACTGCTCATTCCCGCATTCTGGAGAACAACAAGCAATGGGATGGAGAAAAATGCATCATCCTGACATGCAGTTTCACTCCGGGGTCCTGCTCTTTGACATCATATAAGCTGACCCAAGCCGGGTATGAATGGGGACGTCTCAACAAGGACACAGGCAGCAATCCTCATGGCTACCTTCCCACCCATTATGAGAAGGTTCAAATGCTATTGAGTGACCGATTCCTCGGGTTTTACATGGTTCCTGAGAACGGATCGTGGAACTACAACTTTATGGGAGTGAAGCACACGGTGGGCATGAAATATAGCGTCAAACTTGGAACCCCAAAGGAGTTCTATCACGAGGAACATCGACCCACTCATTTCCTGGAGTTCAGCAACATGGAGGAGGCTGACTTCGCTGAGGGAGATCGTGAAGACACCTTTGCTTGA 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Protein: MWNSNDGMPLAPPGTGASMIPPPHPSYTALPPHPSNPTPPPPPVEPTPEEAEAKLEEKARKWMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKFSHDKRVYLGALKFVPHAVFKLLENMPMPWEQVRDVKVLYHITGAITFVNEIPWVVEPIYMAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVHTWFYDHKPLVKTKLINGPSYRRWNLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMPSFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLCVYHSPMVMYIKTEDPDLPAFYYDPLLHPISNTNKERRERNVYEDDGEDDFTLPEGVEPLLKDTHLYTDTTAAGISLLFAPRPFNMRSGKTRRSEDIPLVSEWFKEHCPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWVEVGLQVCRQGYNMLNLLIHRKSLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEALAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQQQREELGLIEQAYDNPHEALSRIKRHLLTQRGFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTGDGQCVVMLQTKFEKFFEKIDLTMLNRLLRLVLDHNIADYVSAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQFYGLLLDLLLLGLTRASEIAGPPQMPNEFMTFWDTKVETRHPIRLYSRYIDKVHIMFKFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENGFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAHKWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQVIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKSIVTEPHHIWPSLTDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNIHGDELISTTISPYEQAAFGSKTDWRVRAISSTNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICVADLRSQIAGYLYGISPPDNPQVKEIRCVVMVPQLGNHQQVNLPLALPEHDFLNNLEPLGWLHTQPNELPQLSPQDVTAHSRILENNKQWDGEKCIILTCSFTPGSCSLTSYKLTQAGYEWGRLNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPENGSWNYNFMGVKHTVGMKYSVKLGTPKEFYHEEHRPTHFLEFSNMEEADFAEGDREDTFA |